Command Line Interface

cinemol automatically installs the command cinemol. See cinemol --help for usage details.

cinemol

Run the CineMol command line interface.

cinemol [OPTIONS] INPUT OUTPUT

Options

--version

Show the version and exit.

-s, --style <style>

Depiction style.

Default:

'ballandstick'

Options:

spacefilling | ballandstick | tube | wireframe

-l, --look <look>

Look of the depiction.

Default:

'cartoon'

Options:

cartoon | glossy

-r, --resolution <resolution>

Resolution of SVG model.

Default:

30

-sc, --scale <scale>

Scale of the model.

Default:

1.0

-fl, --focal-length <focal_length>

Focal length of the camera.

-rx, --rotation-over-x-axis <rotation_over_x_axis>

Rotation over x-axis.

Default:

0.0

-ry, --rotation-over-y-axis <rotation_over_y_axis>

Rotation over y-axis.

Default:

0.0

-rz, --rotation-over-z-axis <rotation_over_z_axis>

Rotation over z-axis.

Default:

0.0

-v, --verbosity <verbosity>

Verbosity level (DEBUG, INFO, WARNING, ERROR, CRITICAL).

Default:

'INFO'

-hs, --include-hydrogens

Include hydrogen atoms.

Arguments

INPUT

Required argument

OUTPUT

Required argument